To export a particular gated population, highlight the gated subset within a gating tree (either by group or individual samples). To export individual samples within a group, highlight one or more samples in the Samples window (e.g. To export all files within a group, highlight the appropriate group within the Group window. Exporting Data as a new FCS or CSV file.Įxporting can be performed either at the level of a group or individual samples, exporting all events or individual gated populations. To learn about exporting data from the Layout Editor, click here. To learn about exporting data from the Table Editor, click here. To learn about exporting directly from the Graph Window, click here. To learn about saving Workspace (WSP), Workspace Template (WSPT), Archival Cytometry Standard (ACS), or Excel (XLS) files, click here.
#CONCATENATE FLOWJO HOW TO#
The following section describes how to export data as FCS or CSV files directly from the workspace using the Export/Concatenate options located within the Document band of actions. For example, you may need to create a new FCS file by merging multiple files together (concatenate) to facilitate rare event analysis, or export CSV files that include your workspace structure (gating tree and columns) for use in a downstream application. Export or Concatenate Sample Data Exporting data from FlowJo is helpful for a variety of tasks.
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